Study in the Multiscale Materials Characterization group

Published
26.3.2024

The Multiscale Materials Characterization group provides a wide range of versatile topics for Master's thesis, research training projects, summer traineeships, and, e.g., Erasmus exchange. Below you will find some topics studied recently by students in the group. In addition to in-house topics, many theses have been made in collaboration with companies or other stakeholders.

The bottom of the page shows some typical workplaces of our alumni.

Vesa Ihanainen: Characteristic measurements of a hybrid pixel detector

Master's thesis
Measurement setup for characterization of a hybrid pixel detector.
Measurement setup for characterization of a hybrid pixel detector. The detector (left) is bombarded by photons from an Am-241 source (right). The radiation is being filtered with a thick aluminum plate (middle).

Abstract

In this thesis, I commissioned and characterized a photon counting x-ray camera for the complex materials research group. The camera Advacam WidePix L 1x10 is a new device for the group and for the Physics Department of Ģֱ. The intention for acquiring the new camera was to enable energy sensitive tomography. I chose energy resolution, spatial resolution, photon counting speed and the noise edge of the energy thresholds as characteristics to be measured and determined from the camera. The measured values agrees with the measurements done on the Medipix 3RX chip which is the base of the acquired camera. The measurements also agrees with the specificiations given by the manufacturer. However, I found out that the energy resolution varies from pixel to pixel. This discrepancy was when measuring the characteristic 59.5409 keV X-ray peak of Americium-241. The ultimate reason for this discrepancy wasn’t found but it is likely due to imperfect pixel-wise energy calibration of the camera.

Lenni Syrjänen: Analysis of internal structure of propellants with X-ray microtomography

Master's thesis in collaboration with Nammo Vihtavuori
Tomographic cross-section of a gunpowder grain.
X-ray tomographic cross-section of a gunpowder grain.

Abstract

Gunpowder is an ancient multipurpose invention from 9th century in China. The chemical composition and physical structure of gunpowder have been developed for centuries to fulfill many purposes which lead into the development of smokeless powder or propellants. Knowledge about the chemistry surrounding propellant is vastly studied and known but precise study of the interior structure of individual propellant grains are lacking. This study validates X-ray microtomography as a method to analyse the inner physical structures of propellant grains from 18 different batches. I measured two grains from each batch. My focus of interest was on interior material domain identification, their sizes, porosity, pore sizes and the correlation of these with the recipe of the propellant. To aid my analysis I used a Python script and batch specific recipes for almost all of the batches provided by Nammo Vihtavuori Oy. Particles identified from the images are nitrocellulose, potassium bitartrate, potassium sulfate, surface finishing compound and two metals: tin and bismuth. Identified components do not change their original grain like shape while inside propellant and their size is also preserved. However, variations inside the batches are high, resulting in different sized particles and pores in varying locations for each grain. Potassium nitrate salt had the only notable correlation to the inner structure of propellant grains: the more there was salt the higher the porosity and thinner the walls between the pores are. Unfortunately, large variations in the atomic number of component elements introduced artifacts into the images, and high variations between grains prevented me from gathering statistically relevant data. Nevertheless, imaging of propellant with X-ray tomography (X-CT) has proven useful giving lots of previously unknown information of the physical structure of propellant grains and their composition, which can be used to develop new improvements to propellant. Method could also be improved on to gain more precise information about the propellant, for example reducing the image artifacts.

Emilia Raiskinmäki: Evaluation of an artificial intelligence-based automatic method for defining organs used in radiation therapy dose planning

Master's thesis in collaboration with the Wellbeing Services County of Central Finland
Comparison of heart segmentation by a machine learning model and a manually generated one.
Comparison of heart segmentation by a machine learning model (dark red) and a manually generated one (light red).

Abstract

In this Master’s Thesis, the clinical performance of an artificial intelligence (AI) based automated method (Siemens OrgansRT, AI-Rad Companion) was investigated in the segmentation of critical organs. Successful radiation therapy requires accurate radiation therapy dose planning. The radiation treatment dose plan is made on a patient-by-patient basis, and segmentation in particular takes a lot of professionals’ time. Thus AI methods have been developed to automate and facilitate the segmentation process. However, the methods have to be tested before clinical use.

In this study, the segmentation made by the automated method was compared to the segmentation made by a professional by using the Dice similarity coefficient (DSC) and the Hausdorff distance (HD).

The study population of the study was collected from dose planning images of 75 patients taken with a computed tomography device. A total of 17 structures were selected for examination in this study.

The structures in the head and neck area, especially the lenses, got the lowest DSC values. The DSC of the right lens is 0.50 and the left one is 0.47. The lungs obtained the highest DSC values from the chest region. The DSC of both lungs is 0.98. The HD values of the structures in the study varied between 4.33–25.07 mm and the HD95 values varied between 2.01–17.07 mm. The highest, i.e. the weakest, HD and HD95 values were obtained for the rectum. The right lens obtained the lowest HD and the right lung obtained the lowest HD95.

The segmentations of each structure included both suitable ones for clinical use, but also those that should be corrected or redone so that they could be used in dose planning.

Joona Huttunen: Identifying and forecasting thunderstorms using weather radar data and machine learning

Master's thesis in collaboration with Finnish Meteorological Institute
Machine learning model predicting thunder cell.
Feature data (left), labelled ground-truth image (middle), and the result of the machine learning model (right).

Abstract

Methods for nowcasting lightning using weather radar data were developed using machine learning models. Reflectivity was selected as the main feature for the prediction. The purpose was to examine if machine learning applications could be used to nowcast thunderstorms with minimal data sets. The emphasis was to find out a model which is based on binary image classification and doesn’t require large sets of training data to work sufficiently. Convolutional neural network was the first choice. Accuracy for the model was 0.83. Another approach was made using random forest model. Precision for class 0 (no lightning) was 0.52, and for class (recorded lightning) 1, 0.90 and with total accuracy of 0.88. To improve the sets more features should be used and possibly larger data sets.

Former group members

The list below features some examples of the alumni of the research group, and the companies they left for after working with us.
  • Prof. Emeritus Markku Kataja (-2021, left for )
  • Prof. Emeritus Jussi Timonen
  • Dr. Kofi Brobbey (-9/2022, left for )
  • Dr. Pekka Kekäläinen (-2021, left for )
  • Dr. Topi Kähärä (-12/2021, left for )
  • Dr. Jussi Virkajärvi (-4/2021, left for )
  • Dr. Timo Riikilä (left for )
  • Dr. Keijo Mattila (left for )
  • Dr. Axel Ekman (left for )
  • Dr. Jukka Kuva (now with the )
  • Dr. Tuomas Turpeinen (left for )
  • Dr. Vesa Aho (still at JYU)
  • Dr. Tuomas Puurtinen (still at JYU)
  • M.Sc. Roope Lehto (now with )
  • M.Sc. Tuomas Sormunen (left for )
  • M.Sc. Lenni Syrjänen (left for )
  • M.Sc. Daniel Ozvoldik, Erasmus trainee from
  • M.Sc. Victory Jacques, Erasmus trainee from
  • M.Sc. Lukáš Maleček, Erasmus trainee from
  • M.Sc. Joona Huttunen
  • M.Sc. Emilia Raiskinmäki
  • M.Sc. Sakari Kapanen
  • M.Sc. Vesa Ihanainen
  • M.Sc. Topi Nykänen
  • M.Sc. Timo Ahola
  • M.Sc. Jussi Laitinen
  • Mr. Riku Tyster
  • Mr. Samuli Aalto
  • Mr. Tommi Hakuli
  • Mrs. Milla Nevanperä