Computational Biomolecular Chemistry Group

Table of contents

Research group type
Research group
Core fields of research
Basic natural phenomena and mathematical thinking
Research areas
Computational Science
Nanoscience Center
Department of Chemistry - Research areas
Chemical Nanoscience
Faculty
Faculty of Mathematics and Science
Department
Department of Chemistry

Research group description

Our aim is to understand and ultimately tailor the chemical properties of biomolecular systems. To achieve our goals we develop new strategies to combine advanced molecular dynamics techniques with high-level quantum chemistry approaches. Our developments are made available to other researchers in the molecular dynamics program package .

Interaction between biology, physics, and chemistry is presently providing a window into the exciting new era of biotechnology. Enzymes, in particular, that can catalyze chemical reactions with a high efficiency and under very mild conditions, provide valuable templates for artificial devices that we will need to meet the challenges of the 21st century. Mimicking biochemical processes however, requires complete understanding of the underlying molecular dynamics. As the relevant time and spatial resolution are notoriously hard to access experimentally, computer simulations are the methods of choice to deepen our understanding of how proteins have evolved to mediate chemical reactions and to use these insight to create devices that mimic biological function.

More about the group 

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Publications

Publication
2025
Available through Open Access

Chemistry : A European Journal.
Gable, Alice
Pohjolainen, Emmi
Groenhof, Gerrit
Cougnon, Fabien B. L.
Publication
2025

Journal of Chemical Information and Modeling.
Valiente, Pedro A.
Guerra, Yasel
Wolf, Maarten G.
Pascual, Isel
Rudiño-Piñera, Enrique
Florent, Isabelle
Pons, Tirso
Groenhof, Gerrit
Publication
2025
Available through Open Access

Journal of Physical Chemistry Letters.
Sokolovskii, Ilia
Luo, Yunyi
Groenhof, Gerrit
Publication
2025
Available through Open Access

Nature Communications.
Krupp, Niclas
Groenhof, Gerrit
Vendrell, Oriol
Publication
2024
Available through Open Access

Journal of the American Chemical Society.
Poh, Yong Rui
Morozov, Dmitry
Kazmierczak, Nathanael P.
Hadt, Ryan G.
Groenhof, Gerrit
Yuen-Zhou, Joel
Publication
2024
Available through Open Access

Journal of Chemical Theory and Computation.
Aho, Noora
Groenhof, Gerrit
Buslaev, Pavel
Publication
2024
Available through Open Access

Protein Journal.
Buslaev, Pavel
Groenhof, Gerrit
Publication
2024
Available through Open Access

Journal of Chemical Physics.
Sokolovskii, Ilia
Groenhof, Gerrit
Publication
2024
Available through Open Access

Journal of Chemical Physics.
Sokolovskii, Ilia
Morozov, Dmitry
Groenhof, Gerrit
Publication
2024
Available through Open Access

Journal of Chemical Information and Modeling.
Jansen, Anton
Aho, Noora
Groenhof, Gerrit
Buslaev, Pavel
Hess, Berk
Publication
2024
Available through Open Access

Nanophotonics.
Sokolovskii, Ilia
Groenhof, Gerrit
Publication
2024
Available through Open Access

Physical Review B.
Pajunpää, Tuomas
Nigmatulin, Fedor
Akkanen, Suvi-Tuuli
Fernandez, Henry
Groenhof, Gerrit
Sun, Zhipei

Research group